Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5066

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5065: 13433 - HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253, at 1667643 to 1669072 13433 mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1669244 to 1670342 13434 mRNA_5067: 13435 - Hypothetical Protein, at 1671093 to 1672541 13435

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,669,014 + -0.2
1,669,052 + 0.2
1,669,352 - 0.1
1,669,642 - 13434 mRNA_5066 0.36 1.0
1,669,907 + 13434 mRNA_5066 0.60 -2.2
1,670,056 + 13434 mRNA_5066 0.74 -0.6
1,670,073 + 13434 mRNA_5066 0.75 0.4
1,670,201 - 13434 mRNA_5066 0.87 -0.2
1,670,356 + -0.1
1,670,356 - -0.1
1,670,358 - -0.8
1,670,367 + -0.5
1,670,367 + 0.5
1,670,382 - -0.3
1,670,497 + -0.8
1,670,500 + 0.7
1,670,518 - 0.9
1,670,610 - -0.1
1,670,611 - -0.4
1,670,624 - 0.8
1,670,689 + 1.1
1,670,690 - -0.0
1,670,745 + -1.4
1,670,795 - 0.2
1,670,795 - -1.4
1,670,796 + -0.8
1,670,800 + 0.5
1,670,805 + -0.2
1,670,807 + 0.4
1,670,807 + -1.1
1,670,819 + 0.9
1,670,823 - -0.2
1,670,828 + 0.1
1,670,832 - 1.1
1,670,841 - 0.5
1,670,854 + 0.5
1,670,955 - -2.2
1,670,959 + -0.2
1,670,964 - -0.9
1,670,968 - 0.0
1,670,971 - 0.4
1,670,979 + 0.3
1,670,988 + -0.9
1,670,996 - 0.1
1,671,096 - -0.3
1,671,111 - 0.6
1,671,125 + -0.9