Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4966

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1421714 to 1425387 13333 mRNA_4966: 13334 - Hypothetical Protein, at 1425631 to 1426865 13334 mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1427740 to 1431350 13335

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,424,796 + 13333 mRNA_4965 0.84 0.0
1,425,062 - -0.3
1,426,093 + 13334 mRNA_4966 0.37 0.7
1,426,548 - 13334 mRNA_4966 0.74 0.7
1,426,673 - 13334 mRNA_4966 0.84 -0.3
1,426,780 - -0.1
1,426,833 - -0.8
1,426,970 + 0.5
1,427,110 + 0.8
1,427,110 + 1.0
1,427,118 + -1.2
1,427,247 - -0.0
1,427,251 + -0.5
1,427,252 - 1.3
1,427,293 + 0.0
1,427,294 + -0.3
1,427,399 + 0.8
1,427,414 + -0.0
1,427,627 - -0.4
1,427,668 + 1.1
1,427,679 + 0.1
1,427,695 - -1.1
1,427,703 + 0.1
1,427,706 - -0.1
1,427,839 - 0.5
1,427,840 - 0.2
1,427,848 - -0.4
1,427,861 + 0.9