Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4857

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4856: 13224 - K02962 RP-S17e, RPS17 small subunit ribosomal protein S17e, at 1158091 to 1158882 13224 mRNA_4857: 13225 - Hypothetical Protein, at 1159127 to 1160011 13225 mRNA_4858: 13226 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1160465 to 1161653 13226

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,159,174 - 1.5
1,159,205 - 0.2
1,159,232 + 13225 mRNA_4857 0.12 0.4
1,159,239 + 13225 mRNA_4857 0.13 -1.0
1,159,246 + 13225 mRNA_4857 0.13 0.1
1,159,352 - 13225 mRNA_4857 0.25 -0.3
1,159,364 - 13225 mRNA_4857 0.27 0.2
1,159,369 + 13225 mRNA_4857 0.27 0.8
1,159,378 + 13225 mRNA_4857 0.28 -0.2
1,159,381 + 13225 mRNA_4857 0.29 -0.1
1,159,399 + 13225 mRNA_4857 0.31 1.2
1,159,403 - 13225 mRNA_4857 0.31 -0.4
1,159,403 + 13225 mRNA_4857 0.31 -0.3
1,159,407 - 13225 mRNA_4857 0.32 -0.2
1,159,505 + 13225 mRNA_4857 0.43 -0.9
1,159,527 + 13225 mRNA_4857 0.45 -0.7
1,159,533 + 13225 mRNA_4857 0.46 0.3
1,159,671 - 13225 mRNA_4857 0.61 0.8
1,159,680 + 13225 mRNA_4857 0.62 -0.2
1,159,693 + 13225 mRNA_4857 0.64 -1.0
1,159,700 + 13225 mRNA_4857 0.65 -0.4
1,160,426 + 0.7
1,160,580 + 0.3
1,160,737 + 13226 mRNA_4858 0.23 -2.4