Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4814

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4813: 13181 - Hypothetical Protein, at 1073710 to 1074508 13181 mRNA_4814: 13182 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1074739 to 1075935 13182 mRNA_4815: 13183 - SUPERFAMILY--SSF143575, at 1075987 to 1081197 13183

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,073,943 + 13181 mRNA_4813 0.29 1.9
1,074,173 - 13181 mRNA_4813 0.58 0.4
1,074,627 - 0.3
1,074,776 - -0.1
1,074,776 - -0.5
1,074,790 + 0.2
1,074,793 - 0.0
1,074,929 - 13182 mRNA_4814 0.16 0.8
1,074,948 - 13182 mRNA_4814 0.17 0.3
1,074,993 - 13182 mRNA_4814 0.21 0.0
1,075,091 - 13182 mRNA_4814 0.29 -1.1
1,075,115 - 13182 mRNA_4814 0.31 1.8
1,075,118 + 13182 mRNA_4814 0.32 -0.0
1,075,350 + 13182 mRNA_4814 0.51 -0.1
1,075,520 + 13182 mRNA_4814 0.65 0.4
1,075,522 + 13182 mRNA_4814 0.65 -0.5
1,075,819 - -0.3
1,076,023 + -0.8
1,076,055 - -0.2
1,076,130 + -0.1
1,076,356 - -0.3
1,076,483 + -1.2
1,076,675 + 13183 mRNA_4815 0.13 -0.2
1,076,804 + 13183 mRNA_4815 0.16 0.5
1,076,827 - 13183 mRNA_4815 0.16 -0.7
1,076,901 + 13183 mRNA_4815 0.18 0.8