Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4802

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4801: 13169 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1046260 to 1047966 13169 mRNA_4802: 13170 - K09313 CUTL homeobox protein cut-like, at 1048232 to 1051035 13170 mRNA_4803: 13171 - BLAST ribosomal protein Mrp49 [Schizosaccharomyces octo..., at 1051383 to 1052079 13171

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,047,739 + 13169 mRNA_4801 0.87 0.3
1,047,895 + -0.6
1,047,989 - 0.6
1,048,031 - -1.5
1,048,042 + -0.4
1,048,045 + 0.4
1,048,048 + -0.2
1,048,344 - 0.3
1,048,361 + -0.3
1,048,483 - -0.2
1,048,504 - 0.1
1,048,643 + 13170 mRNA_4802 0.15 0.3
1,048,794 + 13170 mRNA_4802 0.20 -1.1
1,049,262 - 13170 mRNA_4802 0.37 -0.1
1,049,801 - 13170 mRNA_4802 0.56 0.0
1,049,826 - 13170 mRNA_4802 0.57 -1.1
1,049,912 - 13170 mRNA_4802 0.60 -0.1
1,049,956 - 13170 mRNA_4802 0.61 -0.2
1,050,083 - 13170 mRNA_4802 0.66 -0.2
1,050,102 + 13170 mRNA_4802 0.67 0.1
1,050,250 - 13170 mRNA_4802 0.72 0.5
1,050,593 + 13170 mRNA_4802 0.84 -0.9
1,050,649 + 13170 mRNA_4802 0.86 -1.9
1,050,861 - -1.4
1,050,974 + -1.3
1,051,109 - 0.3
1,051,125 - -0.6
1,051,153 + -0.7
1,051,286 + 0.4