Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4765

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954648 to 957720 13132 mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958000 to 961527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961767 to 963160 13134

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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957,209 + 13132 mRNA_4764 0.83 0.2
957,506 + -0.2
957,617 - 0.3
957,746 + 1.3
957,789 - 0.9
957,789 - 0.7
957,873 - -0.3
957,880 - -1.2
957,915 - 1.1
957,936 + 0.3
958,033 + -0.6
958,213 + 0.7
958,218 - -0.6
958,225 + -0.3
958,228 - -0.7
958,234 - 0.1
958,547 + 13133 mRNA_4765 0.16 0.6
958,656 - 13133 mRNA_4765 0.19 0.4
958,679 + 13133 mRNA_4765 0.19 -0.5
958,964 + 13133 mRNA_4765 0.27 -0.2
959,148 - 13133 mRNA_4765 0.33 -0.5
959,240 + 13133 mRNA_4765 0.35 0.2
959,249 + 13133 mRNA_4765 0.35 -1.0
959,539 - 13133 mRNA_4765 0.44 -0.1
959,547 + 13133 mRNA_4765 0.44 -0.5
959,727 + 13133 mRNA_4765 0.49 -0.3
959,993 + 13133 mRNA_4765 0.56 -0.4
959,996 + 13133 mRNA_4765 0.57 -0.1
960,016 + 13133 mRNA_4765 0.57 -0.2
960,019 - 13133 mRNA_4765 0.57 -1.5
960,092 + 13133 mRNA_4765 0.59 0.4
960,094 + 13133 mRNA_4765 0.59 0.3
960,133 + 13133 mRNA_4765 0.60 -0.2
960,147 - 13133 mRNA_4765 0.61 -1.3
960,147 - 13133 mRNA_4765 0.61 -0.3
960,153 + 13133 mRNA_4765 0.61 -0.8
960,153 + 13133 mRNA_4765 0.61 -0.3
960,153 + 13133 mRNA_4765 0.61 -0.5
960,153 + 13133 mRNA_4765 0.61 0.3
960,153 + 13133 mRNA_4765 0.61 0.2
960,198 - 13133 mRNA_4765 0.62 0.2
960,270 - 13133 mRNA_4765 0.64 -0.4
960,421 - 13133 mRNA_4765 0.69 0.2
960,449 + 13133 mRNA_4765 0.69 -1.3
960,536 + 13133 mRNA_4765 0.72 -0.2
960,597 - 13133 mRNA_4765 0.74 -0.9
960,635 + 13133 mRNA_4765 0.75 0.7
960,681 + 13133 mRNA_4765 0.76 0.6
960,717 + 13133 mRNA_4765 0.77 0.1
961,166 - 13133 mRNA_4765 0.90 0.5
961,475 + 0.1
961,563 - -2.2
961,649 + -1.0
961,652 - 0.2
961,909 + 13134 mRNA_4766 0.10 0.2
961,988 - 13134 mRNA_4766 0.16 1.9
961,988 - 13134 mRNA_4766 0.16 -2.0
962,424 - 13134 mRNA_4766 0.47 1.5