Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4750

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114 13117 mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092 13118 mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921381 to 922742 13119

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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918,412 - 13117 mRNA_4749 0.56 -1.4
918,704 - 13117 mRNA_4749 0.75 -0.7
918,823 - 13117 mRNA_4749 0.82 -0.7
918,858 + 13117 mRNA_4749 0.84 -0.0
918,899 - 13117 mRNA_4749 0.87 -1.8
919,121 + 0.5
919,141 - -0.1
919,155 + -1.0
919,330 + -0.0
919,335 - 0.4
919,451 - 0.7
919,462 + 0.4
919,468 - -0.1
919,471 + 0.1
919,581 + 13118 mRNA_4750 0.10 1.3
919,870 - 13118 mRNA_4750 0.27 1.4
919,871 - 13118 mRNA_4750 0.27 -0.2
920,913 - 13118 mRNA_4750 0.89 -0.1
920,933 - -0.1
920,969 - 1.0
921,040 - 0.9
921,064 - -0.2
921,209 + 1.0
921,260 + 0.6
921,337 + -0.5
921,346 - -1.0
921,372 - 1.1
921,373 + 0.8
921,504 - 0.2
921,518 - 13119 mRNA_4751 0.10 0.8
921,538 + 13119 mRNA_4751 0.12 -0.2
921,583 + 13119 mRNA_4751 0.15 -0.9
921,801 + 13119 mRNA_4751 0.31 -0.1
921,844 + 13119 mRNA_4751 0.34 -0.5
922,065 - 13119 mRNA_4751 0.50 0.3