Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4725

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4725: 13093 - Hypothetical Protein, at 865355 to 866563 13093 mRNA_4726: 13094 - KOG3214 Uncharacterized Zn ribbon-containing protein, at 866956 to 867873 13094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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864,523 - -0.6
864,696 - -2.1
864,714 + 0.3
864,743 + -0.2
864,841 + -1.3
864,845 + 0.3
864,990 - -0.6
864,994 - -0.3
864,995 - 0.2
864,996 + 0.0
865,148 - -1.2
865,152 - -0.5
865,268 - -0.1
865,974 - 13093 mRNA_4725 0.51 0.1
865,984 + 13093 mRNA_4725 0.52 0.2
866,002 + 13093 mRNA_4725 0.54 0.5
866,142 + 13093 mRNA_4725 0.65 -0.3
866,576 + -0.0
866,711 + -0.7
866,721 - -0.4
866,733 - 0.4
866,844 - 0.6
866,846 - -0.3
866,854 + -0.7
866,870 + 0.9
866,876 + 1.5
866,877 + -0.2
867,012 - -0.7
867,027 + -0.1
867,092 - 13094 mRNA_4726 0.15 -1.0
867,148 - 13094 mRNA_4726 0.21 0.4
867,150 - 13094 mRNA_4726 0.21 -0.1
867,156 + 13094 mRNA_4726 0.22 -0.7
867,434 + 13094 mRNA_4726 0.52 0.1
867,445 - 13094 mRNA_4726 0.53 -1.3
867,448 + 13094 mRNA_4726 0.54 0.3
867,468 + 13094 mRNA_4726 0.56 0.6
867,554 - 13094 mRNA_4726 0.65 -0.5