Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4530

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393210 to 395082 12898 mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395175 to 396195 12899

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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392,813 - -0.5
392,840 - -0.2
392,907 + -0.0
392,974 - -0.5
392,984 - 1.0
392,999 - -0.7
393,125 - 0.2
393,139 - -1.0
393,149 + 0.1
393,155 + -0.5
393,164 + 2.4
393,228 + 1.5
393,258 + 0.4
393,289 - 0.0
393,449 + 12898 mRNA_4530 0.13 -1.5
393,860 - 12898 mRNA_4530 0.35 0.3
394,722 + 12898 mRNA_4530 0.81 -0.0
394,898 + -0.3
395,059 + -1.2
395,465 - 12899 mRNA_4531 0.28 -0.1
395,500 + 12899 mRNA_4531 0.32 -0.2
395,520 - 12899 mRNA_4531 0.34 -0.7
395,952 + 12899 mRNA_4531 0.76 -1.3