Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4438

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179176 to 181994 12805 mRNA_4438: 12806 - Hypothetical Protein, at 182518 to 183149 12806 mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183343 to 183707 12807 mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183991 to 186593 12808

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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181,660 - 12805 mRNA_4437 0.88 -1.1
182,260 + 0.0
182,277 + 0.7
182,427 - -0.2
182,439 - -0.1
182,459 + 0.1
182,492 + -1.0
182,519 + 0.6
182,534 + -0.1
182,594 + 12806 mRNA_4438 0.12 -0.8
182,610 + 12806 mRNA_4438 0.15 -0.4
182,754 + 12806 mRNA_4438 0.37 -1.8
182,770 - 12806 mRNA_4438 0.40 1.1
182,892 + 12806 mRNA_4438 0.59 0.2
183,039 + 12806 mRNA_4438 0.82 -0.3
183,067 - 12806 mRNA_4438 0.87 0.8
183,147 - 1.1
183,188 + -0.7
183,230 + 0.0
183,232 - -0.0
183,331 - 0.7
183,384 + 12807 mRNA_4439 0.11 -0.3
183,435 - 12807 mRNA_4439 0.25 -0.6
183,435 - 12807 mRNA_4439 0.25 0.3
183,488 + 12807 mRNA_4439 0.40 -0.2
183,737 + 0.1
183,768 - -1.8
183,802 - 0.1
183,943 + -2.1
183,953 + -2.1