Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4404

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4403: 12771 - Hypothetical Protein, at 99143 to 102687 12771 mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103053 to 104397 12772 mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105098 to 106781 12773

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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102,101 + 12771 mRNA_4403 0.83 0.1
102,104 + 12771 mRNA_4403 0.84 0.1
102,122 - 12771 mRNA_4403 0.84 -1.8
102,276 - 12771 mRNA_4403 0.88 -0.4
102,340 + 0.0
102,417 + 0.6
102,422 + 0.4
102,580 + 0.0
102,706 + -0.1
102,996 + -0.8
103,171 + -1.1
103,176 - -1.0
103,649 + 12772 mRNA_4404 0.44 0.3
103,649 + 12772 mRNA_4404 0.44 -0.3
104,186 - 12772 mRNA_4404 0.84 -0.3
104,467 + 0.2
104,484 - 2.6
104,505 - -0.9
104,524 + 0.2
104,529 - 0.0
104,536 - -0.5
104,639 - -1.3
104,641 - -0.2
104,641 - -0.5
104,661 - -0.7
104,662 - -0.0
104,756 - -1.0
104,937 - 0.4
104,978 + -0.7
105,098 - -0.4
105,112 + -0.3
105,295 + 12773 mRNA_4405 0.12 -0.3
105,395 - 12773 mRNA_4405 0.18 1.1