Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4365

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4365: 12733 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920, at 18950 to 21856 12733 mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22211 to 24480 12734

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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18,058 - -0.4
18,113 + 0.2
18,275 + -0.1
18,635 - -2.2
18,882 + 0.4
18,986 - 0.8
19,137 + 1.8
19,387 + 12733 mRNA_4365 0.15 -0.3
19,390 + 12733 mRNA_4365 0.15 0.0
19,532 - 12733 mRNA_4365 0.20 2.0
19,703 - 12733 mRNA_4365 0.26 0.3
19,813 + 12733 mRNA_4365 0.30 -0.4
20,459 - 12733 mRNA_4365 0.52 -0.5
20,904 + 12733 mRNA_4365 0.67 -1.0
21,199 - 12733 mRNA_4365 0.77 1.6
21,200 + 12733 mRNA_4365 0.77 -0.7
21,352 + 12733 mRNA_4365 0.83 1.8
21,352 - 12733 mRNA_4365 0.83 0.3
21,359 - 12733 mRNA_4365 0.83 -0.2
21,478 + 12733 mRNA_4365 0.87 -1.7
21,496 - 12733 mRNA_4365 0.88 -0.1
21,632 + -0.2
21,651 + 1.2
21,774 + -0.1
21,778 - 0.3
21,810 - -0.6
21,934 - 0.4
21,956 + -0.4
22,068 - 0.0
22,071 - 1.6
22,077 - -0.5
22,080 - 0.5
22,099 + -0.6
22,104 + 0.3
22,104 + -0.5
22,231 + 1.6
22,243 + 0.6