Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4337

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4337: 12705 - HMMPfam-Secretory lipase-PF03583,SUPERFAMILY--SSF53474, at 1940222 to 1941811 12705 mRNA_4338: 12706 - SUPERFAMILY--SSF53098, at 1942344 to 1943662 12706

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,939,383 + -2.1
1,939,605 + -1.5
1,939,732 + 1.0
1,939,831 - -2.0
1,939,953 + -0.4
1,939,980 - 0.3
1,940,049 - -0.1
1,940,095 - -0.5
1,940,100 - -0.1
1,940,339 - -0.4
1,940,344 + 1.9
1,940,671 - 12705 mRNA_4337 0.28 0.3
1,941,122 + 12705 mRNA_4337 0.57 0.5
1,941,264 - 12705 mRNA_4337 0.66 -1.5
1,941,279 + 12705 mRNA_4337 0.66 -0.8
1,941,425 + 12705 mRNA_4337 0.76 0.1
1,941,526 + 12705 mRNA_4337 0.82 -1.8
1,941,555 + 12705 mRNA_4337 0.84 -0.5
1,942,158 + -1.3
1,942,162 + -1.1
1,942,168 + -0.6
1,942,172 + 0.4
1,942,309 + -0.7
1,942,418 + 0.5
1,942,447 - -0.1
1,942,453 + -0.4
1,942,723 - 12706 mRNA_4338 0.29 -2.3