Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4327

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1916431 to 1918530 12695 mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1918797 to 1920453 12696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,915,544 + -0.1
1,915,581 - 1.1
1,915,657 + -0.3
1,916,315 + -1.6
1,916,335 - 1.3
1,916,335 - -0.0
1,916,463 - -0.3
1,916,764 + 12695 mRNA_4327 0.16 0.7
1,917,004 + 12695 mRNA_4327 0.27 -0.2
1,917,089 + 12695 mRNA_4327 0.31 -1.1
1,917,204 - 12695 mRNA_4327 0.37 -0.4
1,917,553 + 12695 mRNA_4327 0.53 -0.6
1,917,721 - 12695 mRNA_4327 0.61 -0.1
1,917,809 - 12695 mRNA_4327 0.66 0.4
1,917,987 + 12695 mRNA_4327 0.74 -0.9
1,918,155 - 12695 mRNA_4327 0.82 0.1
1,918,303 + 12695 mRNA_4327 0.89 -0.3
1,919,038 - 12696 mRNA_4328 0.15 1.6