Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4276

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4275: 12643 - HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065, at 1774189 to 1777372 12643 mRNA_4276: 12644 - Hypothetical Protein, at 1777738 to 1779130 12644

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,776,740 - 12643 mRNA_4275 0.80 -0.3
1,776,886 - 12643 mRNA_4275 0.85 0.1
1,776,897 + 12643 mRNA_4275 0.85 -0.5
1,776,978 - 12643 mRNA_4275 0.88 -1.7
1,776,981 + 12643 mRNA_4275 0.88 -0.2
1,777,133 + 1.1
1,777,270 - -0.6
1,777,290 + -0.6
1,777,293 - -0.3
1,777,298 + 0.4
1,777,393 + 1.4
1,777,427 + 0.5
1,777,454 + -0.6
1,777,463 + -0.1
1,777,871 - 0.7
1,777,892 + 12644 mRNA_4276 0.11 0.1
1,777,895 - 12644 mRNA_4276 0.11 -0.0
1,777,898 + 12644 mRNA_4276 0.11 0.5
1,778,171 + 12644 mRNA_4276 0.31 -0.4
1,778,335 + 12644 mRNA_4276 0.43 -0.7
1,778,370 - 12644 mRNA_4276 0.45 0.1
1,778,482 + 12644 mRNA_4276 0.53 0.1
1,778,500 + 12644 mRNA_4276 0.55 -0.6
1,778,555 + 12644 mRNA_4276 0.59 -0.1
1,778,866 + 12644 mRNA_4276 0.81 0.1
1,779,035 + 0.5
1,779,097 - -0.4
1,779,175 + -0.6
1,779,470 - -1.6
1,779,774 + -0.3
1,779,907 - -0.1
1,779,936 - -0.1
1,779,936 - 0.9
1,779,947 + 0.5
1,779,951 - -0.3
1,779,952 - -0.1
1,779,952 - -0.4
1,779,954 - -1.0
1,779,960 + -0.5
1,779,961 + -0.6
1,779,965 - 0.8
1,779,970 - 1.4
1,780,065 - 0.6
1,780,089 - 1.0
1,780,117 + -0.9