Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4241

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4240: 12608 - KOG1700 Regulatory protein MLP and related LIM proteins, at 1692949 to 1695625 12608 mRNA_4241: 12609 - Hypothetical Protein, at 1696201 to 1696797 12609 mRNA_4242: 12610 - K02985 RP-S3e, RPS3 small subunit ribosomal protein S3e, at 1696957 to 1698115 12610

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,695,266 + 12608 mRNA_4240 0.87 -0.2
1,695,271 + 12608 mRNA_4240 0.87 -0.7
1,695,312 + 12608 mRNA_4240 0.88 0.1
1,695,491 + -0.2
1,695,496 - -0.0
1,695,532 + -0.1
1,695,535 - -0.5
1,695,684 + 0.5
1,695,803 + -0.2
1,695,849 - -0.1
1,695,982 - -0.7
1,696,074 + 0.5
1,696,113 - -0.2
1,696,392 - 12609 mRNA_4241 0.32 0.8
1,696,408 - 12609 mRNA_4241 0.35 0.0
1,696,408 + 12609 mRNA_4241 0.35 0.5
1,696,429 + 12609 mRNA_4241 0.38 0.5
1,696,526 + 12609 mRNA_4241 0.54 -0.8
1,696,547 + 12609 mRNA_4241 0.58 0.6
1,696,558 - 12609 mRNA_4241 0.60 -0.4
1,696,598 + 12609 mRNA_4241 0.66 0.5