Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4211

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1618796 to 1621938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1623456 to 1625668 12580

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,621,157 - 12578 mRNA_4210 0.75 -0.8
1,621,162 + 12578 mRNA_4210 0.75 -1.0
1,621,165 - 12578 mRNA_4210 0.75 -0.7
1,621,179 + 12578 mRNA_4210 0.76 1.1
1,621,326 + 12578 mRNA_4210 0.80 1.4
1,621,614 + 12578 mRNA_4210 0.90 -0.3
1,621,690 - -1.2
1,621,709 - 0.3
1,621,806 + 1.7
1,622,022 - -0.3
1,622,028 + -0.9
1,622,829 - 12579 mRNA_4211 0.67 -1.0
1,622,830 + 12579 mRNA_4211 0.68 -2.6
1,623,165 + -0.8
1,623,258 - -1.6
1,623,386 + 0.3
1,623,442 + -0.8
1,623,491 - 0.9
1,623,648 - 0.3
1,624,117 + 12580 mRNA_4212 0.30 1.0
1,624,127 - 12580 mRNA_4212 0.30 -0.9