Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4150

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4150: 12518 - K15101 SLC25A2_15, ORNT solute carrier family 25 (mitochondrial ornithine transporter) member 2/15, at 1474774 to 1476217 12518 mRNA_4151: 12519 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1476437 to 1477857 12519

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,473,882 - -0.8
1,474,012 - -0.9
1,474,132 - 1.0
1,474,165 + -0.4
1,474,226 + 0.1
1,474,326 + -0.9
1,474,345 - 0.1
1,474,560 - -0.4
1,474,572 - -2.5
1,474,577 + 0.5
1,474,577 - 0.9
1,474,583 + -0.2
1,474,586 + -0.1
1,474,586 + 0.8
1,474,594 - 0.8
1,474,601 - 0.5
1,474,742 - -0.1
1,474,744 - 0.2
1,474,757 + 0.1
1,474,890 - -0.7
1,475,183 + 12518 mRNA_4150 0.28 -0.7
1,475,762 + 12518 mRNA_4150 0.68 -0.6
1,475,767 + 12518 mRNA_4150 0.69 -0.4
1,475,794 + 12518 mRNA_4150 0.71 0.3
1,475,941 - 12518 mRNA_4150 0.81 0.8
1,475,942 + 12518 mRNA_4150 0.81 -0.3
1,476,013 + 12518 mRNA_4150 0.86 0.1
1,476,189 + 1.1
1,476,241 - -1.9
1,476,363 + -0.1
1,476,428 + -0.3
1,476,501 - 0.4
1,476,644 - 12519 mRNA_4151 0.15 -0.1
1,476,655 - 12519 mRNA_4151 0.15 -0.1