Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4060

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4059: 12427 - Hypothetical Protein, at 1255618 to 1257004 12427 mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1257194 to 1260711 12428 mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1260882 to 1262989 12429

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,256,327 + 12427 mRNA_4059 0.51 -1.2
1,256,384 - 12427 mRNA_4059 0.55 -0.8
1,256,555 - 12427 mRNA_4059 0.68 -0.3
1,256,666 + 12427 mRNA_4059 0.76 0.0
1,256,671 - 12427 mRNA_4059 0.76 0.1
1,256,679 - 12427 mRNA_4059 0.76 -0.3
1,256,994 + -0.4
1,257,162 + -0.6
1,257,280 + -1.2
1,257,726 - 12428 mRNA_4060 0.15 -0.6
1,257,730 + 12428 mRNA_4060 0.15 -1.3
1,257,996 - 12428 mRNA_4060 0.23 -1.8
1,258,451 + 12428 mRNA_4060 0.36 0.1
1,259,071 + 12428 mRNA_4060 0.53 0.1
1,260,477 - -0.4
1,260,643 + -0.4
1,260,801 - -0.1
1,260,805 - -0.3
1,260,937 + -0.8
1,260,982 + -0.2
1,261,091 + -0.2
1,261,104 - 12429 mRNA_4061 0.11 -1.6
1,261,245 - 12429 mRNA_4061 0.17 0.7
1,261,416 + 12429 mRNA_4061 0.25 -0.4
1,261,504 + 12429 mRNA_4061 0.30 1.8
1,261,571 + 12429 mRNA_4061 0.33 1.6
1,261,633 - 12429 mRNA_4061 0.36 1.2
1,261,675 + 12429 mRNA_4061 0.38 0.7
1,261,675 + 12429 mRNA_4061 0.38 -1.3