Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3946

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3945: 12313 - HMMPfam-Protein of unknown function (DUF2422)-PF10337, at 963699 to 967662 12313 mRNA_3946: 12314 - K06176 truD, PUS7 tRNA pseudouridine13 synthase, at 967876 to 970743 12314 mRNA_3947: 12315 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 970867 to 972281 12315

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
966,921 - 12313 mRNA_3945 0.81 0.4
967,020 + 12313 mRNA_3945 0.84 0.1
967,636 - -1.1
967,759 + 0.8
967,909 + -0.9
968,235 + 12314 mRNA_3946 0.13 -0.3
968,527 - 12314 mRNA_3946 0.23 -1.5
968,539 - 12314 mRNA_3946 0.23 0.3
969,609 + 12314 mRNA_3946 0.60 -0.2
969,741 - 12314 mRNA_3946 0.65 -1.8
970,443 - 12314 mRNA_3946 0.90 0.2
970,448 + 12314 mRNA_3946 0.90 -0.4
970,456 - 12314 mRNA_3946 0.90 -0.2
970,596 + -0.5
970,727 + -0.2
970,730 - -0.5
970,740 + -1.0
970,740 - 0.3
970,744 + -1.1
970,784 + -1.5
970,790 + -0.1
970,791 - 1.1
970,795 - -1.0
970,799 - -0.6
970,817 + 1.3
970,818 - 0.5
970,825 + -0.3
970,914 - 0.5
970,947 + -0.3
971,098 - 12315 mRNA_3947 0.16 0.4
971,104 - 12315 mRNA_3947 0.17 -1.9
971,104 - 12315 mRNA_3947 0.17 -2.4
971,121 + 12315 mRNA_3947 0.18 0.5
971,250 - 12315 mRNA_3947 0.27 -0.2
971,667 - 12315 mRNA_3947 0.57 -0.4
971,677 + 12315 mRNA_3947 0.57 0.3