Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3936

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944779 to 945196 12303 mRNA_3936: 12304 - Hypothetical Protein, at 945661 to 946219 12304 mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946371 to 947832 12305

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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944,756 + 1.1
945,105 - 12303 mRNA_3935 0.78 0.1
945,141 - 12303 mRNA_3935 0.87 0.6
945,225 + 1.6
945,231 + 0.2
945,233 + 0.2
945,252 - -2.1
945,253 + 2.0
945,268 - 0.5
945,352 - -0.8
945,403 - -0.1
945,404 - 0.8
945,404 - -0.1
945,542 - -0.8
945,546 - 1.0
945,548 + -0.9
945,549 + 0.9
945,562 + -1.4
945,880 + 12304 mRNA_3936 0.39 -0.1
946,093 - 12304 mRNA_3936 0.77 -1.1
946,250 - -0.9