Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3884

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820246 to 821511 12252

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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819,307 + 12251 mRNA_3883 0.68 0.5
819,623 - 12251 mRNA_3883 0.81 -0.5
820,020 + -0.5
820,055 - 0.5
820,162 + -2.9
820,203 + -0.5
820,328 - -0.1
820,351 + -1.1
820,560 + 12252 mRNA_3884 0.25 -1.2
820,587 - 12252 mRNA_3884 0.27 0.2
820,658 - 12252 mRNA_3884 0.33 -1.5
820,914 + 12252 mRNA_3884 0.53 0.0
820,927 - 12252 mRNA_3884 0.54 -0.1
821,072 + 12252 mRNA_3884 0.65 -0.3
821,240 - 12252 mRNA_3884 0.79 0.6
821,297 - 12252 mRNA_3884 0.83 0.9
821,400 + 0.3
821,497 + -1.2
821,504 + -0.6
821,507 + 0.3
821,513 + 1.6
821,530 + -0.3
821,552 + 1.0
821,563 - 0.9
821,604 - -0.1
821,619 - 0.4
821,634 - -0.1
821,634 - 0.5
821,642 + -1.5
821,674 + 2.1
821,692 + 0.2
821,706 + -0.5
821,716 - 1.8
821,766 + 0.3
821,782 + -0.3
821,791 - -0.0
821,794 - -1.4
821,803 - -0.5
821,809 + -0.3
821,811 - -0.9
821,811 - -0.9
821,814 - 0.8
821,822 - 0.5
821,835 - 0.2
821,836 + -0.3
821,841 - 1.4
821,845 + -0.2
821,849 - 0.9
821,857 - 0.4
821,866 - -1.9
821,875 - -0.1
821,876 + -1.6
821,880 - 1.3
821,881 + 0.2
821,884 + 0.1
821,896 + -0.1
821,898 - -1.6
821,899 - 0.0
821,900 - -0.2
821,902 - 0.6
821,903 + -0.2
821,907 - -1.2
821,910 - -2.5
821,910 + -0.2
821,916 - -0.5
821,918 + 0.0
821,924 - 1.0
821,925 - 0.3
821,926 + 0.0
821,931 - -0.5
821,931 + -0.3
821,935 - -0.3
821,939 - 0.8
821,940 + -0.1
821,951 - -1.4
821,954 + 0.2
821,955 - -1.3
821,962 + 0.4
821,964 - -0.1
821,967 - 0.2
821,967 + -0.1
821,970 + -0.1
821,976 + 0.0
821,988 - 0.0
821,989 + -0.2
821,999 + -0.2
821,999 - 0.8
822,026 + -0.2
822,028 - -0.8
822,042 + 0.5
822,048 + -0.4
822,061 + 0.3
822,063 - -0.1
822,068 + 1.2
822,069 + -0.4
822,071 - -0.2
822,072 - -0.9
822,079 - -0.9
822,082 - -0.2
822,082 + 0.7
822,083 - -0.9
822,084 - 0.5
822,086 - -1.4
822,087 + -1.3
822,094 + 0.2
822,097 - -0.6
822,105 + -1.5
822,105 + 0.7
822,115 - -0.0
822,117 + -0.6
822,119 - -0.1
822,127 + -0.2
822,155 + -0.3
822,159 + -1.8
822,166 - 0.0
822,187 - -0.8
822,192 + 0.6
822,197 + 1.4
822,197 - -0.8
822,213 - -0.9
822,220 + -0.5
822,224 - 0.3
822,229 + -0.3
822,246 - -0.1
822,247 - -0.7
822,257 - -1.2
822,257 - 0.8
822,260 + 0.5
822,262 - -0.3
822,265 - 0.5
822,266 + -1.5
822,290 + 0.7
822,299 - -0.1
822,300 - -1.1
822,305 - 0.5
822,311 - 0.3
822,313 + -1.3
822,314 + 0.2
822,320 + -1.7
822,325 - 0.6
822,325 - 0.8
822,330 + -0.3
822,370 - -0.3
822,374 - 0.6
822,376 + 1.3
822,384 + -0.4
822,392 - -1.4
822,400 + 0.2
822,407 - -0.4
822,413 + -0.2
822,445 + 0.1
822,457 - 0.5
822,462 + -0.5
822,470 - 0.4
822,473 + -2.4
822,484 + -2.0
822,485 - 0.1
822,485 - -0.1
822,486 + 1.1
822,495 + -0.6
822,495 - -0.9