Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3814

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640122 to 642119 12181 mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642140 to 643933 12182 mRNA_3815: 12183 - K06631 PLK1 polo-like kinase 1, at 644354 to 647784 12183

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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641,818 - 12181 mRNA_3813 0.85 0.3
642,393 - 12182 mRNA_3814 0.14 1.5
642,474 - 12182 mRNA_3814 0.19 0.1
642,692 - 12182 mRNA_3814 0.31 -1.1
642,695 + 12182 mRNA_3814 0.31 -0.8
643,124 + 12182 mRNA_3814 0.55 0.7
643,397 - 12182 mRNA_3814 0.70 0.0
643,554 - 12182 mRNA_3814 0.79 -0.4
643,696 - 12182 mRNA_3814 0.87 -1.2
643,837 - -1.1
643,867 + -0.3
644,275 - -1.5
644,305 - -2.0
644,307 - 0.2
644,455 - -0.3
644,460 + 1.6