Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3711

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406586 to 407790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408038 to 408694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408733 to 409937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410154 to 411574 12080

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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407,927 - 1.4
407,937 + -0.2
408,220 + 12078 mRNA_3710 0.28 0.1
409,234 + 12079 mRNA_3711 0.42 -1.2
409,240 - 12079 mRNA_3711 0.42 -0.8
409,373 + 12079 mRNA_3711 0.53 -0.9
409,574 + 12079 mRNA_3711 0.70 -0.2
409,676 + 12079 mRNA_3711 0.78 -1.3
409,844 - -0.2