Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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2 + -0.6
2 + 0.1
2 + -0.1
2 + -0.4
2 + -0.1
2 + -0.2
2 + -0.7
14 + -0.2
26 + -0.5
36 + -2.3
39 + -1.0
42 - -0.2
50 + -0.1
50 + 0.7
50 + 0.2
53 - 0.2
57 + -0.4
59 - -0.7
103 + 0.9
104 + -0.4
112 + -0.8
117 - -1.1
120 - -1.9
140 - 0.2
141 + 0.3
146 + -1.2
150 + -0.2
199 - 11905 mRNA_3537 0.12 -0.2
200 + 11905 mRNA_3537 0.12 -0.2
200 - 11905 mRNA_3537 0.12 -0.9
200 - 11905 mRNA_3537 0.12 -0.4
200 - 11905 mRNA_3537 0.12 0.4
201 - 11905 mRNA_3537 0.12 1.1
207 + 11905 mRNA_3537 0.13 -0.5
207 + 11905 mRNA_3537 0.13 -1.8
207 + 11905 mRNA_3537 0.13 1.8
209 + 11905 mRNA_3537 0.13 0.3
210 + 11905 mRNA_3537 0.13 -0.6
213 + 11905 mRNA_3537 0.14 0.7
213 + 11905 mRNA_3537 0.14 0.8
214 + 11905 mRNA_3537 0.14 -0.5
214 + 11905 mRNA_3537 0.14 -0.6
218 + 11905 mRNA_3537 0.14 0.3
221 + 11905 mRNA_3537 0.15 0.1
222 + 11905 mRNA_3537 0.15 -0.5
222 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 -0.9
223 - 11905 mRNA_3537 0.15 0.9
225 - 11905 mRNA_3537 0.15 -1.1
227 - 11905 mRNA_3537 0.15 -0.1
227 + 11905 mRNA_3537 0.15 -3.2
230 + 11905 mRNA_3537 0.16 1.0
230 + 11905 mRNA_3537 0.16 0.7
246 - 11905 mRNA_3537 0.18 0.4
246 - 11905 mRNA_3537 0.18 -0.1
251 + 11905 mRNA_3537 0.18 -0.6
252 + 11905 mRNA_3537 0.18 0.5
260 + 11905 mRNA_3537 0.19 -0.6
262 + 11905 mRNA_3537 0.20 1.9
265 - 11905 mRNA_3537 0.20 -1.0
272 - 11905 mRNA_3537 0.21 0.0
274 + 11905 mRNA_3537 0.21 -1.1
325 - 11905 mRNA_3537 0.27 -0.4
326 - 11905 mRNA_3537 0.27 0.1
341 + 11905 mRNA_3537 0.29 -0.1
359 + 11905 mRNA_3537 0.31 -1.1
362 + 11905 mRNA_3537 0.32 -0.2
367 - 11905 mRNA_3537 0.32 0.4
368 + 11905 mRNA_3537 0.33 -0.8
368 + 11905 mRNA_3537 0.33 -2.6
368 + 11905 mRNA_3537 0.33 -1.3
373 + 11905 mRNA_3537 0.33 -0.4
373 - 11905 mRNA_3537 0.33 -0.1
373 - 11905 mRNA_3537 0.33 -0.1
379 + 11905 mRNA_3537 0.34 0.2
380 + 11905 mRNA_3537 0.34 1.4
417 + 11905 mRNA_3537 0.39 -0.4
452 + 11905 mRNA_3537 0.43 1.6
472 + 11905 mRNA_3537 0.45 1.6
484 + 11905 mRNA_3537 0.47 1.6
489 - 11905 mRNA_3537 0.47 -1.4
503 - 11905 mRNA_3537 0.49 -0.8
511 + 11905 mRNA_3537 0.50 -0.7
518 + 11905 mRNA_3537 0.51 -0.2
523 + 11905 mRNA_3537 0.52 -0.8
533 + 11905 mRNA_3537 0.53 -0.5
539 + 11905 mRNA_3537 0.54 0.8
550 + 11905 mRNA_3537 0.55 -0.7
579 + 11905 mRNA_3537 0.58 0.9
638 - 11905 mRNA_3537 0.66 1.8
640 - 11905 mRNA_3537 0.66 -0.3
657 + 11905 mRNA_3537 0.68 -0.8
762 - 11905 mRNA_3537 0.81 -1.6
768 + 11905 mRNA_3537 0.82 -0.1
791 - 11905 mRNA_3537 0.84 -1.1
801 + 11905 mRNA_3537 0.86 -0.4
804 + 11905 mRNA_3537 0.86 0.6
822 + 11905 mRNA_3537 0.88 1.1
827 + 11905 mRNA_3537 0.89 -0.3
842 + -1.5
842 + -0.1
845 - -0.8
962 - -0.5
990 + -0.2
1,074 + -0.8
1,080 - 1.1
1,107 + 1.6
1,110 - 0.3
1,123 + 0.1
1,143 + -0.6
1,256 - -0.2
1,278 + -0.1
1,336 + -0.5
1,371 - -0.9
1,404 - -0.3
1,429 + 0.1
1,450 + 0.3
1,528 + 2.4
1,550 + 0.4
1,647 - -0.2
1,653 + -0.5
1,661 - -1.8
1,663 + -0.7
1,719 + -0.3
1,720 + 0.4
1,760 + -2.6
1,814 - -0.9
1,902 - -0.9