Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3534

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711 11903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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330,208 + -0.4
330,213 + -0.4
330,232 + 0.1
330,242 - 0.0
330,343 + 1.6
330,361 - -0.4
330,485 - -1.2
330,509 + -0.7
330,653 + 0.1
331,078 + 11902 mRNA_3534 0.20 0.0
331,081 - 11902 mRNA_3534 0.20 -0.3
331,234 - 11902 mRNA_3534 0.50 0.6
331,236 + 11902 mRNA_3534 0.51 0.7
331,379 + 11902 mRNA_3534 0.79 -1.6
331,487 - -0.6
331,509 - -0.1
331,514 + 0.5
331,520 - -1.0
331,538 + -0.5
331,651 - 0.5
332,134 - 11903 mRNA_3535 0.41 -0.6