Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3492

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232549 to 233056 11859 mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233269 to 234150 11860 mRNA_3493: 11861 - K06944 K06944 uncharacterized protein, at 234580 to 236697 11861

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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233,023 + -0.9
233,223 - 0.4
233,550 - 11860 mRNA_3492 0.32 0.7
233,638 - 11860 mRNA_3492 0.42 -0.6
233,913 - 11860 mRNA_3492 0.73 0.4
234,515 + -0.2
235,107 + 11861 mRNA_3493 0.25 0.5