Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3463

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156661 to 162747 11830 mRNA_3463: 11831 - Hypothetical Protein, at 163497 to 164279 11831 mRNA_3464: 11832 - K02684 PRI1 DNA primase small subunit, at 164658 to 166622 11832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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162,963 + 1.1
163,104 - -0.7
163,108 - 0.1
163,122 - -1.5
163,243 - 0.6
163,265 - 0.4
163,270 - 0.4
163,270 - 0.7
163,272 + -1.2
163,274 - 0.3
163,274 + -0.5
163,275 + 1.0
163,419 - 1.1
163,422 + -0.9
163,437 + -0.3
163,440 + 0.5
163,560 + -0.3
163,566 + -0.2
163,606 - 11831 mRNA_3463 0.14 0.4
163,714 - 11831 mRNA_3463 0.28 -0.1
163,725 - 11831 mRNA_3463 0.29 -1.3
163,864 - 11831 mRNA_3463 0.47 0.0
163,896 - 11831 mRNA_3463 0.51 -0.0
163,997 - 11831 mRNA_3463 0.64 1.0
164,036 + 11831 mRNA_3463 0.69 -0.9
164,099 - 11831 mRNA_3463 0.77 0.1
164,118 + 11831 mRNA_3463 0.79 -1.0
164,157 - 11831 mRNA_3463 0.84 0.2
164,310 - 1.0
164,327 + 0.7
164,429 + -1.2
164,569 + 0.3
164,571 + 0.5
164,576 + -1.0
164,577 - 1.5
164,619 + 0.2