Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3418

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3417: 11785 - Hypothetical Protein, at 43744 to 46912 11785 mRNA_3418: 11786 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 47383 to 48909 11786

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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46,545 - 11785 mRNA_3417 0.88 0.2
46,554 - 11785 mRNA_3417 0.89 -0.1
46,560 + 11785 mRNA_3417 0.89 -0.3
46,679 - -0.2
46,689 - 0.2
46,695 - -0.4
46,983 - -0.3
46,989 - -0.2
46,998 + 0.0
47,100 + -0.9
47,112 + 0.0
47,138 - 1.9
47,157 - 0.5
47,157 + 0.3
47,159 + 0.6
47,161 + 0.2
47,267 - -0.0
47,270 + -1.2
47,277 + -0.4
47,299 + 0.1
47,301 + -0.8
47,308 - -0.6
47,308 - -0.9
47,312 + -1.4
47,445 + 0.6
48,325 - 11786 mRNA_3418 0.62 -1.8
48,584 + 11786 mRNA_3418 0.79 -2.3
48,910 + -0.5
49,097 - -0.5
49,103 + 1.6
49,180 + 0.3
49,194 - -0.1
49,195 + -0.2
49,214 + 0.4
49,325 - 1.9
49,349 - 0.9
49,371 + -0.7
49,372 + 1.6
49,376 - 0.3
49,376 - -0.6
49,378 - 0.2
49,378 - -0.2
49,379 - 1.7
49,384 + 0.1
49,387 + 0.1
49,393 - -0.1
49,396 - 0.3
49,398 + 0.2
49,400 + 0.6
49,402 + -0.2
49,406 + -0.3
49,407 + -0.2
49,409 + -0.2
49,409 + -1.1
49,420 - -0.6
49,472 - -0.4
49,496 - -1.2
49,503 - 0.3
49,505 + 0.1
49,505 + -0.8
49,508 - -0.2
49,524 + 0.2
49,527 + -0.1
49,532 - -0.5
49,534 - 0.2
49,574 + -0.9
49,582 + 0.8
49,605 + 0.7
49,610 + -0.5
49,626 - -0.0
49,626 - 0.8
49,627 - -1.0
49,627 - 0.8
49,629 + -0.1
49,638 - -0.3
49,644 + 0.7
49,663 + 0.9
49,736 - -0.4
49,754 - -0.8
49,766 - -0.9
49,776 + 0.5
49,777 - 0.1
49,784 - 0.2
49,803 - -0.4