Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3410

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20794 to 26649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27190 to 28187 11778

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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26,269 + -2.0
26,289 + 0.4
26,293 + 0.3
26,306 + -0.6
26,435 - -0.3
26,460 + 0.2
26,543 + -2.6
26,559 - -0.3
26,572 + -0.4
26,589 - -0.7
26,590 + -0.4
26,596 + 1.1
26,602 + 0.3
26,621 - 0.4
26,640 - -0.4
26,645 + -0.9
26,647 - 0.1
26,654 + 0.4
26,654 - -0.1
26,666 - -0.4
26,915 + -0.3
26,941 - -0.2
26,942 - -1.5
26,947 + -0.6
26,957 + -1.3
27,048 + -0.6
27,130 + 0.5
27,371 + 11778 mRNA_3410 0.18 -0.1
27,378 + 11778 mRNA_3410 0.19 0.3
27,394 - 11778 mRNA_3410 0.20 0.6
27,403 + 11778 mRNA_3410 0.21 -0.1
27,518 - 11778 mRNA_3410 0.33 0.8
27,574 - 11778 mRNA_3410 0.38 2.5
28,109 + 0.7
28,416 + -0.5
28,491 - 0.8
28,493 + 0.8
28,718 + -0.6
28,730 + 0.4
28,738 + -0.6
28,753 - -1.9
28,771 + 0.1
28,771 + 0.4
28,786 - 0.9
28,787 + -1.3
28,789 + 0.0
28,798 + -0.6
28,813 - -1.0
28,832 + 0.3