Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3379

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3379: 11747 - Hypothetical Protein, at 537005 to 537944 11747 mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877 11748

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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536,061 + -0.5
536,183 - -0.5
536,186 - 0.2
536,194 - -0.3
536,195 - -0.2
536,349 - 0.8
536,504 - 0.8
536,506 + 1.9
536,535 - 0.7
536,536 + -0.3
536,613 - 0.2
536,815 + -1.2
536,819 + -0.6
536,950 - -0.0
536,975 + -1.0
536,999 + 0.0
537,072 - 0.8
537,072 - -0.9
537,078 + -1.1
537,078 + -0.3
537,263 - 11747 mRNA_3379 0.27 -0.2
537,282 + 11747 mRNA_3379 0.29 -1.7
537,427 + 11747 mRNA_3379 0.45 -1.8
537,427 + 11747 mRNA_3379 0.45 -1.7
537,427 + 11747 mRNA_3379 0.45 0.0
537,433 + 11747 mRNA_3379 0.46 0.3
537,522 - 11747 mRNA_3379 0.55 -0.3
537,557 - 11747 mRNA_3379 0.59 -1.8
537,614 + 11747 mRNA_3379 0.65 -0.2
537,844 - 11747 mRNA_3379 0.89 1.3
537,850 + 11747 mRNA_3379 0.90 0.1
537,960 + 0.1
538,116 - -2.2
538,127 + -1.3
538,240 + 0.3
538,441 - 1.6
538,573 - 1.8
538,704 + 11748 mRNA_3380 0.12 -0.2
538,706 + 11748 mRNA_3380 0.12 -0.2
538,715 + 11748 mRNA_3380 0.12 0.1
538,726 - 11748 mRNA_3380 0.13 -2.0
538,835 + 11748 mRNA_3380 0.16 0.0