Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3249

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3248: 11616 - Hypothetical Protein, at 210155 to 211275 11616 mRNA_3249: 11617 - Hypothetical Protein, at 211752 to 212300 11617 mRNA_3250: 11618 - K00415 QCR2, UQCRC2 ubiquinol-cytochrome c reductase core subunit 2, at 212456 to 214047 11618

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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210,768 - 11616 mRNA_3248 0.55 0.4
210,898 + 11616 mRNA_3248 0.66 -0.7
210,970 + 11616 mRNA_3248 0.73 -0.1
211,043 - 11616 mRNA_3248 0.79 -0.4
211,226 + -0.3
211,241 - -0.7
211,386 - -0.4
211,439 - -0.0
211,621 - -1.4
211,789 - 0.1
211,836 + 11617 mRNA_3249 0.15 -0.8
211,920 - 11617 mRNA_3249 0.31 -0.4
211,925 - 11617 mRNA_3249 0.32 -0.8
211,930 - 11617 mRNA_3249 0.32 -1.0
211,962 + 11617 mRNA_3249 0.38 0.3
212,064 + 11617 mRNA_3249 0.57 1.5
212,120 + 11617 mRNA_3249 0.67 -2.6
212,233 - 11617 mRNA_3249 0.88 -0.2
212,242 - 11617 mRNA_3249 0.89 -0.1
212,261 - -0.5
212,263 - -0.8
212,267 + -0.0
212,380 + -0.0
212,387 + -0.7
212,387 + 1.0
212,390 - -0.3
212,438 + 0.8
212,441 + 0.4