Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3218

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118796 to 120170 11586

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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117,804 - -0.3
118,254 - 0.0
118,273 - -0.7
118,278 - -1.0
118,298 + -2.2
118,299 - -0.5
118,438 + 0.4
118,443 + 0.9
118,448 + 1.5
118,450 + -0.4
118,453 + -0.6
118,584 + -0.6
118,630 - -1.0
118,637 + 1.7
118,796 + -0.7
118,815 - -0.5
118,829 - 0.1
118,848 - 0.2
118,856 - 0.1
118,857 - 1.2
118,863 - -0.2
118,871 + -0.3
118,888 + 0.6
118,890 + 0.2
118,891 - -1.3
118,914 + 0.0
118,925 + -0.2
118,926 - -0.3
118,926 - 0.1
118,930 - -0.2
118,935 - 11586 mRNA_3218 0.10 -1.8
118,936 + 11586 mRNA_3218 0.10 0.4
118,936 - 11586 mRNA_3218 0.10 -0.9
118,943 - 11586 mRNA_3218 0.11 -0.2
118,959 + 11586 mRNA_3218 0.12 0.4
119,003 + 11586 mRNA_3218 0.15 0.0
119,080 - 11586 mRNA_3218 0.21 0.4
119,109 - 11586 mRNA_3218 0.23 -0.4
119,407 - 11586 mRNA_3218 0.44 -0.7
119,449 - 11586 mRNA_3218 0.47 0.4
119,459 + 11586 mRNA_3218 0.48 -1.9
119,478 - 11586 mRNA_3218 0.50 -0.8
119,556 - 11586 mRNA_3218 0.55 0.4
119,558 - 11586 mRNA_3218 0.55 -0.3
119,572 + 11586 mRNA_3218 0.56 -0.2
119,575 - 11586 mRNA_3218 0.57 0.7
119,599 - 11586 mRNA_3218 0.58 -0.7
119,718 - 11586 mRNA_3218 0.67 0.7
119,756 + 11586 mRNA_3218 0.70 -1.8
119,922 - 11586 mRNA_3218 0.82 0.3
120,048 - -0.2
120,145 - -0.6
120,232 - -0.7
120,921 - -0.1