Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3132

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3131: 11499 - KOG1230 Protein containing repeated kelch motifs, at 391641 to 394728 11499 mRNA_3132: 11500 - Hypothetical Protein, at 394889 to 395179 11500 mRNA_3133: 11501 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 395348 to 397742 11501

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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393,920 + 11499 mRNA_3131 0.74 1.3
394,198 - 11499 mRNA_3131 0.83 -2.7
394,321 - 11499 mRNA_3131 0.87 -0.2
394,367 + 11499 mRNA_3131 0.88 0.3
394,489 - -0.2
394,497 - 0.5
394,510 + -0.5
394,517 - 0.0
394,644 - -0.2
394,801 + 0.1
394,805 - -0.0
394,810 - -0.6
394,824 + -0.4
394,869 - 1.8
394,938 + 11500 mRNA_3132 0.17 0.5
394,993 - 11500 mRNA_3132 0.36 1.7
395,031 - 11500 mRNA_3132 0.49 -0.4
395,225 - -0.6
395,255 + -0.1
395,379 - 0.3
395,508 + -0.5
395,515 - 0.1
395,643 + 11501 mRNA_3133 0.12 2.1
395,683 + 11501 mRNA_3133 0.14 0.2
395,705 + 11501 mRNA_3133 0.15 1.7
395,820 + 11501 mRNA_3133 0.20 1.5
395,832 - 11501 mRNA_3133 0.20 -0.6
395,860 - 11501 mRNA_3133 0.21 1.1
395,919 - 11501 mRNA_3133 0.24 -0.6
395,967 - 11501 mRNA_3133 0.26 -0.1
396,015 + 11501 mRNA_3133 0.28 -1.3
396,092 - 11501 mRNA_3133 0.31 -0.0