Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3010

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3009: 11377 - Hypothetical Protein, at 65747 to 66498 11377 mRNA_3010: 11378 - K10398 KIF11, EG5 kinesin family member 11, at 66880 to 69062 11378

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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65,912 - 11377 mRNA_3009 0.22 -0.9
65,913 + 11377 mRNA_3009 0.22 -0.0
65,914 + 11377 mRNA_3009 0.22 -0.1
65,918 + 11377 mRNA_3009 0.23 -0.1
65,939 - 11377 mRNA_3009 0.26 -1.5
65,941 + 11377 mRNA_3009 0.26 -1.2
66,007 + 11377 mRNA_3009 0.35 0.9
66,015 - 11377 mRNA_3009 0.36 0.4
66,018 + 11377 mRNA_3009 0.36 -1.2
66,033 + 11377 mRNA_3009 0.38 0.3
66,052 - 11377 mRNA_3009 0.41 -0.7
66,073 - 11377 mRNA_3009 0.43 -0.4
66,077 - 11377 mRNA_3009 0.44 -0.4
66,335 - 11377 mRNA_3009 0.78 -0.2
66,651 - 1.0
66,782 - 0.1
66,813 + 0.2
66,820 + 1.3
66,821 - -1.3
66,825 - -0.8
66,829 - -1.1
66,834 + 0.9
66,834 - 0.2
66,834 - -0.6
66,835 + -0.6
66,839 - 0.2
66,840 + 0.9
66,841 + 0.9
66,843 + 0.7
66,851 + -0.7
66,852 - -0.9
66,852 - 0.2
66,977 + 0.2
66,981 + -1.2
66,983 + -0.1
66,992 - -1.2
66,993 + 0.2
67,169 + 11378 mRNA_3010 0.13 -1.4
67,171 - 11378 mRNA_3010 0.13 0.6
67,172 - 11378 mRNA_3010 0.13 -0.6
67,427 + 11378 mRNA_3010 0.25 2.2
67,431 + 11378 mRNA_3010 0.25 -0.0
67,742 + 11378 mRNA_3010 0.39 0.8
68,012 - 11378 mRNA_3010 0.52 0.8
68,161 + 11378 mRNA_3010 0.59 0.2
68,459 - 11378 mRNA_3010 0.72 -0.3
68,716 + 11378 mRNA_3010 0.84 -0.2
68,902 - -0.1
69,031 - 0.0
69,394 + -0.8
69,510 + -1.6
69,565 + 0.2
69,639 + -0.4
69,844 - -0.9
70,030 - 0.1