Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2944

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614601 to 617050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617308 to 618975 11313

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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613,708 - 1.0
613,719 - 0.2
613,786 - 1.5
613,787 + 1.6
613,787 + 0.7
613,788 + -0.2
613,805 - -0.3
613,816 - -0.6
613,821 + -0.2
613,822 + -1.5
613,885 - -0.5
613,997 + 0.1
614,029 - -0.8
614,044 + 0.9
614,053 - 0.4
614,054 + -0.1
614,055 + 0.3
614,071 + -1.0
614,072 + 0.2
614,072 + -0.4
614,072 - -1.6
614,073 - 0.7
614,076 - -1.7
614,076 - -0.1
614,078 - 1.4
614,084 - 0.1
614,101 - 0.6
614,101 + -0.3
614,101 + -0.5
614,103 - 0.3
614,104 - 0.2
614,105 - 0.1
614,109 - 1.0
614,408 + -0.7
614,549 + 0.1
614,666 - -0.6
614,816 - 0.4
615,280 + 11312 mRNA_2944 0.28 0.9
615,672 - 11312 mRNA_2944 0.44 0.3
615,834 + 11312 mRNA_2944 0.50 -2.0
616,541 - 11312 mRNA_2944 0.79 -1.9
616,549 - 11312 mRNA_2944 0.80 1.0
616,565 - 11312 mRNA_2944 0.80 0.8
616,845 + -0.2
616,851 - -1.3
617,103 - -0.9
617,167 - -0.5
617,178 + 0.6
617,181 + -0.2
617,275 - -0.9
617,327 - -1.2