Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2801

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2800: 11168 - SUPERFAMILY--SSF52047, at 245486 to 250213 11168 mRNA_2801: 11169 - Hypothetical Protein, at 250557 to 251555 11169 mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251577 to 253280 11170

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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249,615 + 11168 mRNA_2800 0.87 -1.0
250,034 + 0.2
250,349 + -0.2
250,491 - 0.0
250,601 + 1.1
250,702 + 11169 mRNA_2801 0.15 -0.7
250,726 - 11169 mRNA_2801 0.17 0.1
250,771 - 11169 mRNA_2801 0.21 -0.5
250,810 + 11169 mRNA_2801 0.25 -1.7
250,893 - 11169 mRNA_2801 0.34 -0.8
250,930 + 11169 mRNA_2801 0.37 -0.8
251,012 - 11169 mRNA_2801 0.46 0.1
251,057 + 11169 mRNA_2801 0.50 -0.3
251,193 - 11169 mRNA_2801 0.64 0.7
251,219 - 11169 mRNA_2801 0.66 0.2
251,384 - 11169 mRNA_2801 0.83 0.3
251,384 + 11169 mRNA_2801 0.83 1.1
251,480 - -0.6
251,534 - 1.3
251,588 + 0.3
252,537 - 11170 mRNA_2802 0.56 0.9