Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2785

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2784: 11152 - K20241 WDR44, RAB11BP WD repeat-containing protein 44, at 204617 to 208124 11152 mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208531 to 209463 11153 mRNA_2786: 11154 - Hypothetical Protein, at 209744 to 210942 11154

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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207,613 - 11152 mRNA_2784 0.85 -0.5
207,771 - 11152 mRNA_2784 0.90 -0.6
207,773 - 11152 mRNA_2784 0.90 -0.2
207,780 + 0.3
207,884 - 0.3
208,021 - -0.0
208,066 + 0.5
208,508 - 0.3
208,602 - -0.7
208,656 - 11153 mRNA_2785 0.13 0.9
208,662 + 11153 mRNA_2785 0.14 -0.8
208,691 - 11153 mRNA_2785 0.17 -1.8
208,790 + 11153 mRNA_2785 0.28 -0.1
209,219 - 11153 mRNA_2785 0.74 -0.5
209,278 + 11153 mRNA_2785 0.80 0.1
209,374 - -3.4
210,026 - 11154 mRNA_2786 0.24 0.4
210,107 + 11154 mRNA_2786 0.30 0.4
210,397 - 11154 mRNA_2786 0.54 -0.4
210,407 + 11154 mRNA_2786 0.55 0.2
210,431 + 11154 mRNA_2786 0.57 -0.0