Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2782

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2782: 11150 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 198574 to 201487 11150 mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202335 to 202970 11151

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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197,581 + 1.1
197,609 - 0.1
197,660 - -0.9
197,676 + 0.4
197,679 + 1.3
197,687 - -1.2
197,702 + -2.0
197,721 - -1.4
197,721 + 0.5
197,746 - 0.7
197,823 + 0.2
197,828 - -1.3
197,960 - -0.8
197,971 - -0.3
197,975 - -0.9
197,976 - -0.5
197,982 + -0.6
197,986 - -0.1
197,988 - 0.2
197,990 - 0.2
198,009 + -0.1
198,010 + -0.5
198,019 - 0.1
198,023 + -0.1
198,025 - -1.2
198,139 + 0.8
198,151 + -0.2
198,159 - -0.2
198,306 - 0.8
198,310 - 0.3
198,321 + -0.8
198,331 - -0.6
198,337 + -0.6
198,468 + 1.5
198,491 + 0.1
198,510 + -0.6
199,391 - 11150 mRNA_2782 0.28 -0.9
200,132 - 11150 mRNA_2782 0.53 -0.6
201,016 + 11150 mRNA_2782 0.84 -0.7
201,285 - 0.2
201,566 - -0.1
201,864 - 0.2
201,867 - -0.0
201,877 - 0.3
201,878 + -0.3
201,878 + -1.2
201,894 + 0.1
202,018 - -0.3
202,020 + -0.4
202,030 + -2.1
202,038 - 0.1
202,041 + -0.3
202,042 + -0.5