Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2748

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2748: 11116 - KOG3772 M-phase inducer phosphatase, at 131237 to 131877 11116 mRNA_2749: 11117 - K02146 ATPeV0D, ATP6D V-type H+-transporting ATPase subunit d, at 132510 to 133901 11117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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130,247 - -0.5
130,392 + -0.5
130,540 + -0.6
130,549 + 0.2
130,555 + 0.1
130,688 + -1.2
130,701 + 0.4
130,706 - 0.8
130,712 + -0.2
130,719 + 0.5
130,825 - -0.8
130,843 - 0.3
130,861 - -0.7
130,865 + -0.5
130,870 + 0.5
130,870 + -0.4
130,874 - -0.1
130,874 + 0.2
130,899 - 0.3
130,900 + -0.2
130,908 + -1.2
130,916 - 0.5
130,923 + -0.7
130,924 + 0.7
130,927 + -0.3
130,994 - -0.9
131,011 - 0.0
131,019 + 0.2
131,020 + -0.2
131,025 - -0.1
131,029 + 1.0
131,033 + -0.2
131,049 + 0.2
131,051 + -0.1
131,056 + -0.0
131,061 + 1.2
131,104 + -0.6
131,117 + -1.8
131,153 + 0.7
131,207 + 0.0
131,208 + -0.9
131,300 - 0.2
131,437 - 11116 mRNA_2748 0.31 -0.9
131,467 + 11116 mRNA_2748 0.36 -0.4
131,846 + -1.8
131,870 - 1.4
132,017 - -2.4
132,020 + 0.4
132,023 - -0.2
132,041 + 0.5
132,181 + -0.2