Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2709

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2708: 11076 - Hypothetical Protein, at 52159 to 52641 11076 mRNA_2709: 11077 - Hypothetical Protein, at 52775 to 54075 11077 mRNA_2710: 11078 - BLAST putative protein (N-terminal fragment) [Melanopsichiu..., at 54672 to 56113 11078

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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51,926 + 0.4
51,928 + -0.1
51,964 + 0.7
51,964 + -1.0
52,085 - -0.4
52,087 + 0.3
52,379 - 11076 mRNA_2708 0.46 0.1
52,503 - 11076 mRNA_2708 0.71 -0.4
52,981 - 11077 mRNA_2709 0.16 -0.1
52,988 + 11077 mRNA_2709 0.16 0.0
52,990 + 11077 mRNA_2709 0.17 2.6
53,108 - 11077 mRNA_2709 0.26 -0.1
53,232 + 11077 mRNA_2709 0.35 0.3
53,556 - 11077 mRNA_2709 0.60 -1.2
53,693 + 11077 mRNA_2709 0.71 -0.1
53,754 + 11077 mRNA_2709 0.75 -0.8
53,989 - -1.1
54,277 + 1.0
54,287 + -0.4
54,291 - -1.3
54,299 + -0.2
54,421 - 0.0
54,473 - -1.7
54,563 - -0.3
54,566 - -1.0
54,567 + 0.3
54,572 + -0.3
54,582 + -0.7
54,595 - 0.2
55,036 - 11078 mRNA_2710 0.25 -1.5
55,074 - 11078 mRNA_2710 0.28 0.3