Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2689

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2688: 11056 - Hypothetical Protein, at 8682 to 9968 11056 mRNA_2689: 11057 - K07422 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1, at 10233 to 12338 11057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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9,677 - 11056 mRNA_2688 0.77 -0.9
9,797 - 11056 mRNA_2688 0.87 0.7
9,923 + -0.2
10,066 + -0.3
10,122 + -0.6
10,352 - 1.2
10,613 - 11057 mRNA_2689 0.18 -0.3
10,676 + 11057 mRNA_2689 0.21 1.1
10,948 + 11057 mRNA_2689 0.34 -0.2
10,955 + 11057 mRNA_2689 0.34 -0.5
10,955 + 11057 mRNA_2689 0.34 1.7
10,955 + 11057 mRNA_2689 0.34 0.0
11,175 - 11057 mRNA_2689 0.45 -0.3
11,213 - 11057 mRNA_2689 0.47 -1.7
11,248 - 11057 mRNA_2689 0.48 -1.2
11,374 + 11057 mRNA_2689 0.54 -1.2
11,433 - 11057 mRNA_2689 0.57 0.5
11,536 + 11057 mRNA_2689 0.62 -0.4
11,554 + 11057 mRNA_2689 0.63 0.5
11,733 + 11057 mRNA_2689 0.71 -0.0
11,734 + 11057 mRNA_2689 0.71 -1.2
11,792 + 11057 mRNA_2689 0.74 -0.5
11,847 - 11057 mRNA_2689 0.77 0.6
11,848 + 11057 mRNA_2689 0.77 -0.0
11,960 + 11057 mRNA_2689 0.82 0.8
12,147 + 0.0
12,260 - 0.2
12,300 - -0.8
12,308 + -1.4
12,338 + -0.2
12,402 + -0.6
12,411 - 1.0
12,416 + 0.4
12,438 + 0.8
12,445 + -0.9
12,446 - 0.7
12,447 + -0.2
12,454 + 0.5
12,457 + 0.7
12,492 - -0.2
12,548 - 0.6
12,631 + -0.4
12,650 - -0.3
12,895 + -0.7
13,053 - -0.8
13,057 - -0.3
13,068 + -0.7
13,229 + -0.6
13,313 + 0.1