Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2679

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758219 to 759317 11046 mRNA_2679: 11047 - K14262 DUG2 di- and tripeptidase, at 759389 to 763569 11047 mRNA_2680: 11048 - Hypothetical Protein, at 764065 to 765232 11048

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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758,407 + 11046 mRNA_2678 0.17 -0.5
758,710 - 11046 mRNA_2678 0.45 0.2
758,793 + 11046 mRNA_2678 0.52 0.1
759,076 + 11046 mRNA_2678 0.78 -0.2
759,078 - 11046 mRNA_2678 0.78 -1.5
759,176 + 11046 mRNA_2678 0.87 1.7
759,239 + -0.4
759,241 + -1.0
759,271 + 1.9
759,271 + -1.1
759,383 - -0.9
759,421 + -1.6
759,517 + -0.1
759,811 - 11047 mRNA_2679 0.10 -0.1
759,835 + 11047 mRNA_2679 0.11 0.9
759,855 + 11047 mRNA_2679 0.11 -0.3
759,940 - 11047 mRNA_2679 0.13 0.3
759,941 + 11047 mRNA_2679 0.13 -0.0
760,064 - 11047 mRNA_2679 0.16 -1.0
760,100 - 11047 mRNA_2679 0.17 -0.3
760,117 + 11047 mRNA_2679 0.17 -0.0
760,244 + 11047 mRNA_2679 0.20 -0.1
760,423 - 11047 mRNA_2679 0.25 0.2
760,604 - 11047 mRNA_2679 0.29 0.4
760,853 - 11047 mRNA_2679 0.35 -1.3
760,871 + 11047 mRNA_2679 0.35 0.2
761,398 - 11047 mRNA_2679 0.48 -1.1
761,398 - 11047 mRNA_2679 0.48 0.5
761,452 + 11047 mRNA_2679 0.49 0.9
761,557 - 11047 mRNA_2679 0.52 -1.2
762,322 + 11047 mRNA_2679 0.70 0.3
762,495 - 11047 mRNA_2679 0.74 0.8
762,630 + 11047 mRNA_2679 0.78 -0.2
762,689 - 11047 mRNA_2679 0.79 -1.7
762,737 + 11047 mRNA_2679 0.80 1.3
762,920 - 11047 mRNA_2679 0.84 0.6
763,036 - 11047 mRNA_2679 0.87 0.4
763,041 + 11047 mRNA_2679 0.87 -0.4
763,175 + -0.8
763,187 + 0.2
763,314 - -1.0
763,333 - -0.4
763,484 + -0.9
763,490 + 0.5
763,530 + -0.4
763,628 + 0.6
763,629 + -0.2
763,684 + -0.4
763,755 + -0.4
763,767 - -1.5
763,789 - -0.4
763,932 - -0.3
764,075 - 0.6
764,105 - 0.5
764,111 + 0.4
764,269 + 11048 mRNA_2680 0.17 0.7
764,478 - 11048 mRNA_2680 0.35 0.2
764,489 - 11048 mRNA_2680 0.36 -0.1
764,490 - 11048 mRNA_2680 0.36 -1.2
764,532 + 11048 mRNA_2680 0.40 0.3