Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2627

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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623,305 - -0.7
623,452 - 0.4
623,457 - 0.2
623,460 + -1.7
623,461 + 0.3
623,586 + 0.6
623,608 + -0.2
623,620 - 0.0
623,622 - -0.7
623,627 - -0.7
623,631 - -0.0
623,752 + 0.2
623,761 + -0.4
623,764 - -2.0
623,771 - -1.1
623,906 + 0.2
623,908 + -0.6
623,913 + -0.1
623,919 + -0.4
624,074 + 0.5
624,167 + 0.8
624,467 + 10995 mRNA_2627 0.20 -0.4
624,787 + 10995 mRNA_2627 0.51 -0.5
624,787 + 10995 mRNA_2627 0.51 0.7
624,797 + 10995 mRNA_2627 0.52 -1.3
624,948 - 10995 mRNA_2627 0.66 1.0
625,525 + -1.4
625,526 + -0.3
625,531 + 0.1
625,652 - -0.9
625,658 - 0.4
625,663 + 0.0
625,675 + 1.3
625,692 + 0.3
625,816 - 0.4
625,821 + 0.7
625,831 + -0.1
625,942 - -0.1
626,101 + 1.4