Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2594

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2593: 10961 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 554356 to 555895 10961 mRNA_2594: 10962 - K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein, at 556139 to 559559 10962 mRNA_2595: 10963 - K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1, at 559652 to 561565 10963

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
555,915 - -0.3
556,039 - -1.2
556,192 - -1.0
556,214 - -0.8
556,264 + -3.1
556,486 - 10962 mRNA_2594 0.10 -1.7
556,804 + 10962 mRNA_2594 0.19 -0.1
556,943 - 10962 mRNA_2594 0.24 -0.2
556,945 - 10962 mRNA_2594 0.24 -1.5
556,987 + 10962 mRNA_2594 0.25 1.4
557,055 - 10962 mRNA_2594 0.27 -0.1
557,055 + 10962 mRNA_2594 0.27 -0.5
557,319 - 10962 mRNA_2594 0.34 0.3
557,431 + 10962 mRNA_2594 0.38 -0.1
557,558 - 10962 mRNA_2594 0.41 1.3
557,613 - 10962 mRNA_2594 0.43 -0.6
557,633 + 10962 mRNA_2594 0.44 -0.2
557,646 - 10962 mRNA_2594 0.44 -1.5
558,069 + 10962 mRNA_2594 0.56 0.2
558,709 + 10962 mRNA_2594 0.75 0.5
559,284 + -0.1
559,287 - -1.9
559,588 - 1.5
559,589 - -0.3
559,590 - -0.1
560,057 - 10963 mRNA_2595 0.21 0.3
560,065 - 10963 mRNA_2595 0.22 -1.6