Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2562

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2561: 10929 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 446568 to 451968 10929 mRNA_2562: 10930 - Hypothetical Protein, at 452219 to 453821 10930 mRNA_2563: 10931 - Interpro F-box-like, at 454095 to 455181 10931

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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452,291 - -0.0
452,449 + 10930 mRNA_2562 0.14 1.0
452,453 - 10930 mRNA_2562 0.15 -0.5
452,543 + 10930 mRNA_2562 0.20 -1.3
452,606 + 10930 mRNA_2562 0.24 0.1
452,704 - 10930 mRNA_2562 0.30 0.6
452,798 - 10930 mRNA_2562 0.36 -0.6
453,039 + 10930 mRNA_2562 0.51 0.4
453,102 - 10930 mRNA_2562 0.55 -2.2
453,267 - 10930 mRNA_2562 0.65 -0.2
453,277 + 10930 mRNA_2562 0.66 0.1
453,284 - 10930 mRNA_2562 0.66 -0.9
453,453 - 10930 mRNA_2562 0.77 -0.0
453,456 + 10930 mRNA_2562 0.77 1.1
453,579 + 10930 mRNA_2562 0.85 -2.3
453,724 + -0.8
453,745 + -0.0
453,886 - 0.4
454,141 + -0.2
454,170 + 1.3
454,174 + -0.3
454,287 + 10931 mRNA_2563 0.18 -0.6
454,432 - 10931 mRNA_2563 0.31 1.1
454,477 - 10931 mRNA_2563 0.35 -0.4
454,585 + 10931 mRNA_2563 0.45 0.1
454,635 - 10931 mRNA_2563 0.50 1.2