Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2544

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404821 to 406181 10912

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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404,000 - 10911 mRNA_2543 0.55 1.2
404,264 - 10911 mRNA_2543 0.81 -1.1
404,443 + -0.7
404,564 + 1.5
404,849 + -0.0
405,047 - 10912 mRNA_2544 0.17 0.1
405,090 + 10912 mRNA_2544 0.20 -0.6
405,146 - 10912 mRNA_2544 0.24 0.4
405,295 - 10912 mRNA_2544 0.35 -0.0
405,343 - 10912 mRNA_2544 0.38 0.5
405,620 - 10912 mRNA_2544 0.59 -0.0
405,625 + 10912 mRNA_2544 0.59 0.3
405,745 + 10912 mRNA_2544 0.68 -0.9
405,858 - 10912 mRNA_2544 0.76 -1.4
405,900 + 10912 mRNA_2544 0.79 0.0
405,972 + 10912 mRNA_2544 0.85 -0.5
405,973 - 10912 mRNA_2544 0.85 0.3
405,985 - 10912 mRNA_2544 0.86 -0.5
406,001 - 10912 mRNA_2544 0.87 0.6
406,026 - 10912 mRNA_2544 0.89 1.7
406,042 - 10912 mRNA_2544 0.90 -0.1
406,054 + 0.3
406,144 + -1.1
406,179 + 0.3
406,185 - -0.8
406,187 + -0.6
406,324 - -0.2
406,334 + 0.2
406,335 - -0.8
406,336 + 0.6
406,336 - 0.2
406,338 + 0.1
406,342 + 0.3
406,346 - -0.3
406,347 + -1.2
406,347 + 0.0
406,492 - -0.2
406,522 + -1.7
406,944 + 1.1
407,104 - 1.0