Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2521

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345046 to 346549 10888 mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346896 to 348680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135 10890

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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346,236 + 10888 mRNA_2520 0.79 0.7
346,239 - 10888 mRNA_2520 0.79 -1.8
346,712 + 0.5
348,269 - 10889 mRNA_2521 0.77 -0.4
348,617 + -0.2
348,680 + -0.5
348,709 + 1.1
348,713 - -1.3
348,724 - -0.4
348,747 - -0.4
348,748 + -0.5
348,748 + 1.4
348,749 + -0.5
348,752 + -0.1
348,763 - -0.9
348,776 + -0.9
348,778 - 0.1
348,805 + -0.3
348,841 + -0.9
348,855 + -1.3
348,857 - -0.4
348,859 - 0.2
348,860 + 0.9
348,864 + -0.3
348,866 - -0.2
348,868 - -0.0
348,869 + -0.3
348,869 + 0.2
348,894 - -1.5
348,896 - -0.1
348,900 + -1.3
348,901 + -0.1
348,902 + 0.2
348,904 + 0.1
348,931 + 0.0
348,991 - 10890 mRNA_2522 0.12 -0.8
348,998 - 10890 mRNA_2522 0.13 -0.8
349,012 - 10890 mRNA_2522 0.14 0.6
349,012 - 10890 mRNA_2522 0.14 -0.2
349,023 - 10890 mRNA_2522 0.14 0.7
349,031 - 10890 mRNA_2522 0.15 0.4
349,044 + 10890 mRNA_2522 0.16 0.1
349,068 - 10890 mRNA_2522 0.18 0.9
349,181 + 10890 mRNA_2522 0.27 0.4
349,208 - 10890 mRNA_2522 0.29 -0.0
349,210 + 10890 mRNA_2522 0.29 -0.3
349,380 + 10890 mRNA_2522 0.42 -0.1
349,512 + 10890 mRNA_2522 0.52 -0.2
349,627 - 10890 mRNA_2522 0.61 -0.3