Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2515

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2514: 10882 - Hypothetical Protein, at 330199 to 330672 10882 mRNA_2515: 10883 - KOG0035 Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily), at 330969 to 334313 10883 mRNA_2516: 10884 - KOG0627 Heat shock transcription factor, at 334568 to 336151 10884

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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329,983 - -0.2
330,024 + -0.2
330,026 + -0.4
330,238 + 0.1
330,404 + 10882 mRNA_2514 0.43 0.2
330,459 - 10882 mRNA_2514 0.55 -0.3
330,591 - 10882 mRNA_2514 0.83 -0.0
330,605 + 10882 mRNA_2514 0.86 0.7
330,608 + 10882 mRNA_2514 0.86 0.1
330,647 - 0.7
330,647 - 0.8
330,741 - 2.0
330,751 - -0.6
330,764 + -0.6
330,787 - 0.0
330,793 - 0.1
330,794 + 0.2
330,794 + 0.3
330,797 - -0.4
330,920 + -1.5
330,924 + -1.2
330,925 + 1.4
332,388 + 10883 mRNA_2515 0.42 1.2
332,598 + 10883 mRNA_2515 0.49 0.8
332,781 - 10883 mRNA_2515 0.54 -0.8
334,252 + -0.7
334,321 + -1.0
335,112 - 10884 mRNA_2516 0.34 -0.6