Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2451

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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162,602 + 10818 mRNA_2450 0.71 -0.6
162,604 - 10818 mRNA_2450 0.71 0.2
162,724 - 10818 mRNA_2450 0.79 0.2
162,862 - 10818 mRNA_2450 0.88 0.1
162,891 + -0.8
162,902 - -2.1
162,919 + -1.1
163,053 + 0.3
163,063 - 0.5
163,063 - -0.2
163,067 - 0.7
163,077 - 0.4
163,484 + 0.0
163,518 + -1.7
163,686 + 10819 mRNA_2451 0.19 -1.5
163,985 + 10819 mRNA_2451 0.38 -1.4
164,234 + 10819 mRNA_2451 0.54 -0.2
164,690 - 10819 mRNA_2451 0.83 0.3
164,801 + -0.8
164,829 + -0.1
164,934 - -0.1
164,976 - 0.4
165,075 + -0.4
165,130 + 0.5
165,241 - 0.6
165,261 + -1.1
165,427 + 10820 mRNA_2452 0.20 -0.8
165,427 + 10820 mRNA_2452 0.20 0.2
165,847 - 10820 mRNA_2452 0.59 0.3
165,917 - 10820 mRNA_2452 0.66 -0.1